Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vrk1Q80X41 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vrk1Q80X41 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.47■□□□□ 0.55
Vrk1Q80X41 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vrk1Q80X41 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.47■□□□□ 0.55
Vrk1Q80X41 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Vrk1Q80X41 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vrk1Q80X41 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vrk1Q80X41 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vrk1Q80X41 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.46■□□□□ 0.55
Vrk1Q80X41 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vrk1Q80X41 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.46■□□□□ 0.55
Vrk1Q80X41 Mir5133-201ENSMUST00000174955 77 ntBASIC18.46■□□□□ 0.55
Vrk1Q80X41 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Vrk1Q80X41 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vrk1Q80X41 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vrk1Q80X41 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vrk1Q80X41 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vrk1Q80X41 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vrk1Q80X41 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vrk1Q80X41 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.45■□□□□ 0.54
Vrk1Q80X41 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.45■□□□□ 0.54
Vrk1Q80X41 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.45■□□□□ 0.54
Vrk1Q80X41 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Vrk1Q80X41 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Vrk1Q80X41 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.45■□□□□ 0.54
Vrk1Q80X41 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Vrk1Q80X41 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vrk1Q80X41 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Vrk1Q80X41 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vrk1Q80X41 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vrk1Q80X41 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.44■□□□□ 0.54
Vrk1Q80X41 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vrk1Q80X41 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vrk1Q80X41 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Vrk1Q80X41 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vrk1Q80X41 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Vrk1Q80X41 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vrk1Q80X41 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vrk1Q80X41 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vrk1Q80X41 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vrk1Q80X41 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vrk1Q80X41 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vrk1Q80X41 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vrk1Q80X41 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Gm13146-201ENSMUST00000118508 780 ntBASIC18.42■□□□□ 0.54
Vrk1Q80X41 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vrk1Q80X41 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vrk1Q80X41 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vrk1Q80X41 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vrk1Q80X41 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.41■□□□□ 0.54
Vrk1Q80X41 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.41■□□□□ 0.54
Vrk1Q80X41 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vrk1Q80X41 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vrk1Q80X41 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vrk1Q80X41 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vrk1Q80X41 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Gm12441-201ENSMUST00000121806 588 ntBASIC18.4■□□□□ 0.54
Vrk1Q80X41 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Vrk1Q80X41 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Vrk1Q80X41 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Vrk1Q80X41 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vrk1Q80X41 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Vrk1Q80X41 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vrk1Q80X41 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Vrk1Q80X41 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vrk1Q80X41 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms