Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srrm3Q80WV7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Srrm3Q80WV7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Srrm3Q80WV7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Srrm3Q80WV7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Srrm3Q80WV7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Srrm3Q80WV7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Srrm3Q80WV7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Srrm3Q80WV7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Srrm3Q80WV7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Srrm3Q80WV7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Srrm3Q80WV7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Srrm3Q80WV7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Srrm3Q80WV7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Srrm3Q80WV7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Srrm3Q80WV7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.08■□□□□ 0.81
Srrm3Q80WV7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Srrm3Q80WV7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Srrm3Q80WV7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.08■□□□□ 0.8
Srrm3Q80WV7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Srrm3Q80WV7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Grk6-206ENSMUST00000224995 2971 ntBASIC20.07■□□□□ 0.8
Srrm3Q80WV7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Rarb-207ENSMUST00000225921 2756 ntBASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Srrm3Q80WV7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Srrm3Q80WV7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms