Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim62Q80V85 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim62Q80V85 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim62Q80V85 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim62Q80V85 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim62Q80V85 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim62Q80V85 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.07■□□□□ 0.8
Trim62Q80V85 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim62Q80V85 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Trim62Q80V85 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim62Q80V85 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.07■□□□□ 0.8
Trim62Q80V85 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim62Q80V85 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim62Q80V85 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim62Q80V85 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim62Q80V85 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Trim62Q80V85 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim62Q80V85 Gm10493-201ENSMUST00000097270 612 ntBASIC20.06■□□□□ 0.8
Trim62Q80V85 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim62Q80V85 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim62Q80V85 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim62Q80V85 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim62Q80V85 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim62Q80V85 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim62Q80V85 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim62Q80V85 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim62Q80V85 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim62Q80V85 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim62Q80V85 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim62Q80V85 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim62Q80V85 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim62Q80V85 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim62Q80V85 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim62Q80V85 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim62Q80V85 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim62Q80V85 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim62Q80V85 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim62Q80V85 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim62Q80V85 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.03■□□□□ 0.8
Trim62Q80V85 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim62Q80V85 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim62Q80V85 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim62Q80V85 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim62Q80V85 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim62Q80V85 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim62Q80V85 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.02■□□□□ 0.8
Trim62Q80V85 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim62Q80V85 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim62Q80V85 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim62Q80V85 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim62Q80V85 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim62Q80V85 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim62Q80V85 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim62Q80V85 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim62Q80V85 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim62Q80V85 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim62Q80V85 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim62Q80V85 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim62Q80V85 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim62Q80V85 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim62Q80V85 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim62Q80V85 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim62Q80V85 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim62Q80V85 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim62Q80V85 Gm18284-201ENSMUST00000172604 624 ntBASIC20.01■□□□□ 0.79
Trim62Q80V85 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim62Q80V85 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim62Q80V85 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim62Q80V85 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim62Q80V85 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim62Q80V85 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim62Q80V85 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim62Q80V85 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim62Q80V85 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20■□□□□ 0.79
Trim62Q80V85 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim62Q80V85 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20■□□□□ 0.79
Trim62Q80V85 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim62Q80V85 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim62Q80V85 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim62Q80V85 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim62Q80V85 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms