Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp38Q80UU2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp38Q80UU2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rpp38Q80UU2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rpp38Q80UU2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp38Q80UU2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.39■□□□□ 0.69
Rpp38Q80UU2 Gm27801-201ENSMUST00000184174 223 ntBASIC19.39■□□□□ 0.69
Rpp38Q80UU2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rpp38Q80UU2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp38Q80UU2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rpp38Q80UU2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.39■□□□□ 0.69
Rpp38Q80UU2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rpp38Q80UU2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp38Q80UU2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp38Q80UU2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp38Q80UU2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Gm40848-201ENSMUST00000221998 324 ntBASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp38Q80UU2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp38Q80UU2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpp38Q80UU2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpp38Q80UU2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpp38Q80UU2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpp38Q80UU2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rpp38Q80UU2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.33■□□□□ 0.69
Rpp38Q80UU2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpp38Q80UU2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rpp38Q80UU2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpp38Q80UU2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms