Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr5Q80TP3 Gm10175-202ENSMUST00000208752 441 ntBASIC17.09■□□□□ 0.33
Ubr5Q80TP3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr5Q80TP3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr5Q80TP3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr5Q80TP3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr5Q80TP3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubr5Q80TP3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ubr5Q80TP3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubr5Q80TP3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Ubr5Q80TP3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.08■□□□□ 0.33
Ubr5Q80TP3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.08■□□□□ 0.33
Ubr5Q80TP3 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.08■□□□□ 0.33
Ubr5Q80TP3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Ubr5Q80TP3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubr5Q80TP3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ubr5Q80TP3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Ubr5Q80TP3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr5Q80TP3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Gm15378-201ENSMUST00000121894 207 ntBASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.07■□□□□ 0.32
Ubr5Q80TP3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr5Q80TP3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.06■□□□□ 0.32
Ubr5Q80TP3 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr5Q80TP3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.05■□□□□ 0.32
Ubr5Q80TP3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr5Q80TP3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr5Q80TP3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ubr5Q80TP3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr5Q80TP3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr5Q80TP3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr5Q80TP3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ubr5Q80TP3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr5Q80TP3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr5Q80TP3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr5Q80TP3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr5Q80TP3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.02■□□□□ 0.32
Ubr5Q80TP3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr5Q80TP3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ubr5Q80TP3 Gm18666-201ENSMUST00000190039 958 ntBASIC17.02■□□□□ 0.31
Ubr5Q80TP3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr5Q80TP3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr5Q80TP3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr5Q80TP3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr5Q80TP3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.02■□□□□ 0.31
Ubr5Q80TP3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr5Q80TP3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ubr5Q80TP3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.01■□□□□ 0.31
Ubr5Q80TP3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr5Q80TP3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.01■□□□□ 0.31
Ubr5Q80TP3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr5Q80TP3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr5Q80TP3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms