Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf139Q7TMV1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf139Q7TMV1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf139Q7TMV1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf139Q7TMV1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf139Q7TMV1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf139Q7TMV1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Gm27801-201ENSMUST00000184174 223 ntBASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf139Q7TMV1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf139Q7TMV1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf139Q7TMV1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf139Q7TMV1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf139Q7TMV1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.74■□□□□ 0.91
Rnf139Q7TMV1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Rnf139Q7TMV1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.74■□□□□ 0.91
Rnf139Q7TMV1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf139Q7TMV1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rnf139Q7TMV1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf139Q7TMV1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf139Q7TMV1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf139Q7TMV1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.7■□□□□ 0.9
Rnf139Q7TMV1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Rnf139Q7TMV1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf139Q7TMV1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf139Q7TMV1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf139Q7TMV1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf139Q7TMV1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf139Q7TMV1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf139Q7TMV1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rnf139Q7TMV1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.68■□□□□ 0.9
Rnf139Q7TMV1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf139Q7TMV1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf139Q7TMV1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rnf139Q7TMV1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 116.2 ms