Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg5Q71M36 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cspg5Q71M36 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.97■□□□□ 0.79
Cspg5Q71M36 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cspg5Q71M36 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cspg5Q71M36 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cspg5Q71M36 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.97■□□□□ 0.79
Cspg5Q71M36 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.97■□□□□ 0.79
Cspg5Q71M36 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.96■□□□□ 0.79
Cspg5Q71M36 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Gm13234-201ENSMUST00000120010 747 ntBASIC19.96■□□□□ 0.79
Cspg5Q71M36 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cspg5Q71M36 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Cspg5Q71M36 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.95■□□□□ 0.78
Cspg5Q71M36 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Cspg5Q71M36 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.95■□□□□ 0.78
Cspg5Q71M36 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cspg5Q71M36 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cspg5Q71M36 Golph3-202ENSMUST00000226517 2359 ntBASIC19.94■□□□□ 0.78
Cspg5Q71M36 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.94■□□□□ 0.78
Cspg5Q71M36 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Cspg5Q71M36 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.94■□□□□ 0.78
Cspg5Q71M36 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.94■□□□□ 0.78
Cspg5Q71M36 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cspg5Q71M36 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cspg5Q71M36 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cspg5Q71M36 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cspg5Q71M36 Gm7514-201ENSMUST00000209475 934 ntBASIC19.93■□□□□ 0.78
Cspg5Q71M36 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cspg5Q71M36 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cspg5Q71M36 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cspg5Q71M36 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cspg5Q71M36 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cspg5Q71M36 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Cspg5Q71M36 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.92■□□□□ 0.78
Cspg5Q71M36 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg5Q71M36 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cspg5Q71M36 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg5Q71M36 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg5Q71M36 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg5Q71M36 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg5Q71M36 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg5Q71M36 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg5Q71M36 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg5Q71M36 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg5Q71M36 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg5Q71M36 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg5Q71M36 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg5Q71M36 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.91■□□□□ 0.78
Cspg5Q71M36 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg5Q71M36 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cspg5Q71M36 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg5Q71M36 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg5Q71M36 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cspg5Q71M36 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg5Q71M36 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms