Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnih3Q6ZWS4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnih3Q6ZWS4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Mir6236-201ENSMUST00000184437 123 ntBASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cnih3Q6ZWS4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Gm7143-201ENSMUST00000222811 859 ntBASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cnih3Q6ZWS4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnih3Q6ZWS4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cnih3Q6ZWS4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cnih3Q6ZWS4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cnih3Q6ZWS4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cnih3Q6ZWS4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cnih3Q6ZWS4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cnih3Q6ZWS4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cnih3Q6ZWS4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cnih3Q6ZWS4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cnih3Q6ZWS4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnih3Q6ZWS4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cnih3Q6ZWS4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms