Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Ddx58Q6Q899 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ddx58Q6Q899 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ddx58Q6Q899 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ddx58Q6Q899 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ddx58Q6Q899 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ddx58Q6Q899 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ddx58Q6Q899 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Ddx58Q6Q899 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ddx58Q6Q899 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ddx58Q6Q899 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx58Q6Q899 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx58Q6Q899 Gm12933-201ENSMUST00000120203 872 ntBASIC24.06■■□□□ 1.44
Ddx58Q6Q899 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx58Q6Q899 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx58Q6Q899 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx58Q6Q899 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx58Q6Q899 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx58Q6Q899 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx58Q6Q899 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.03■■□□□ 1.44
Ddx58Q6Q899 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx58Q6Q899 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx58Q6Q899 Gm7860-201ENSMUST00000121190 879 ntBASIC24.02■■□□□ 1.44
Ddx58Q6Q899 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ddx58Q6Q899 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC24.02■■□□□ 1.44
Ddx58Q6Q899 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC24.02■■□□□ 1.44
Ddx58Q6Q899 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx58Q6Q899 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx58Q6Q899 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx58Q6Q899 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx58Q6Q899 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx58Q6Q899 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx58Q6Q899 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx58Q6Q899 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx58Q6Q899 Gm13534-201ENSMUST00000121169 513 ntBASIC24■■□□□ 1.43
Ddx58Q6Q899 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx58Q6Q899 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
Ddx58Q6Q899 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx58Q6Q899 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Ddx58Q6Q899 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx58Q6Q899 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx58Q6Q899 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.99■■□□□ 1.43
Ddx58Q6Q899 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.99■■□□□ 1.43
Ddx58Q6Q899 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx58Q6Q899 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Ddx58Q6Q899 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx58Q6Q899 Gm10602-201ENSMUST00000098239 609 ntBASIC23.99■■□□□ 1.43
Ddx58Q6Q899 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx58Q6Q899 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx58Q6Q899 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Ddx58Q6Q899 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
Ddx58Q6Q899 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx58Q6Q899 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx58Q6Q899 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx58Q6Q899 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.98■■□□□ 1.43
Ddx58Q6Q899 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
Ddx58Q6Q899 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx58Q6Q899 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Ddx58Q6Q899 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx58Q6Q899 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx58Q6Q899 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.97■■□□□ 1.43
Ddx58Q6Q899 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx58Q6Q899 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
Ddx58Q6Q899 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx58Q6Q899 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx58Q6Q899 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx58Q6Q899 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx58Q6Q899 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx58Q6Q899 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx58Q6Q899 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms