Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casc4Q6P2L7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc4Q6P2L7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc4Q6P2L7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Casc4Q6P2L7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Casc4Q6P2L7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc4Q6P2L7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc4Q6P2L7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Casc4Q6P2L7 Smad6-203ENSMUST00000179458 273 ntBASIC19.56■□□□□ 0.72
Casc4Q6P2L7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.56■□□□□ 0.72
Casc4Q6P2L7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Casc4Q6P2L7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Gm26833-201ENSMUST00000180899 440 ntBASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Casc4Q6P2L7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc4Q6P2L7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.53■□□□□ 0.72
Casc4Q6P2L7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc4Q6P2L7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.52■□□□□ 0.71
Casc4Q6P2L7 AA386476-201ENSMUST00000098781 1665 ntBASIC19.52■□□□□ 0.71
Casc4Q6P2L7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Casc4Q6P2L7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Gm11421-201ENSMUST00000122124 294 ntBASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
Casc4Q6P2L7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Casc4Q6P2L7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casc4Q6P2L7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Casc4Q6P2L7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms