Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.72■□□□□ 0.59
Cpsf6Q6NVF9 Gm43137-201ENSMUST00000198052 594 ntBASIC18.72■□□□□ 0.59
Cpsf6Q6NVF9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.72■□□□□ 0.59
Cpsf6Q6NVF9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf6Q6NVF9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf6Q6NVF9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf6Q6NVF9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf6Q6NVF9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.71■□□□□ 0.59
Cpsf6Q6NVF9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cpsf6Q6NVF9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Cpsf6Q6NVF9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Cpsf6Q6NVF9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf6Q6NVF9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Cpsf6Q6NVF9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.7■□□□□ 0.58
Cpsf6Q6NVF9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cpsf6Q6NVF9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf6Q6NVF9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.7■□□□□ 0.58
Cpsf6Q6NVF9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.7■□□□□ 0.58
Cpsf6Q6NVF9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cpsf6Q6NVF9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf6Q6NVF9 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf6Q6NVF9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cpsf6Q6NVF9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf6Q6NVF9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Spcs1-204ENSMUST00000226782 949 ntBASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf6Q6NVF9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf6Q6NVF9 Serp2-204ENSMUST00000228055 705 ntBASIC18.64■□□□□ 0.57
Cpsf6Q6NVF9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms