Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga7Q6DD96 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga7Q6DD96 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga7Q6DD96 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga7Q6DD96 Golgb1-201ENSMUST00000023534 498 ntBASIC18.74■□□□□ 0.59
Pcdhga7Q6DD96 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga7Q6DD96 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga7Q6DD96 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga7Q6DD96 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhga7Q6DD96 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhga7Q6DD96 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga7Q6DD96 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga7Q6DD96 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga7Q6DD96 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.71■□□□□ 0.58
Pcdhga7Q6DD96 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Gm12922-201ENSMUST00000120626 809 ntBASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga7Q6DD96 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga7Q6DD96 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga7Q6DD96 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhga7Q6DD96 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga7Q6DD96 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga7Q6DD96 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga7Q6DD96 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhga7Q6DD96 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga7Q6DD96 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga7Q6DD96 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga7Q6DD96 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga7Q6DD96 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga7Q6DD96 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhga7Q6DD96 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga7Q6DD96 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga7Q6DD96 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga7Q6DD96 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga7Q6DD96 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga7Q6DD96 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga7Q6DD96 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Pcdhga7Q6DD96 Grk6-206ENSMUST00000224995 2971 ntBASIC18.66■□□□□ 0.58
Pcdhga7Q6DD96 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga7Q6DD96 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga7Q6DD96 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms