Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.95■□□□□ 0.78
Six1Q62231 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six1Q62231 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six1Q62231 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six1Q62231 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Six1Q62231 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Six1Q62231 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.94■□□□□ 0.78
Six1Q62231 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six1Q62231 Rps24-207ENSMUST00000224568 714 ntBASIC19.94■□□□□ 0.78
Six1Q62231 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Six1Q62231 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six1Q62231 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six1Q62231 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Six1Q62231 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six1Q62231 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six1Q62231 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six1Q62231 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Six1Q62231 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.93■□□□□ 0.78
Six1Q62231 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.93■□□□□ 0.78
Six1Q62231 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.93■□□□□ 0.78
Six1Q62231 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Six1Q62231 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six1Q62231 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six1Q62231 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Six1Q62231 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Six1Q62231 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.92■□□□□ 0.78
Six1Q62231 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six1Q62231 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six1Q62231 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.91■□□□□ 0.78
Six1Q62231 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six1Q62231 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six1Q62231 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six1Q62231 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six1Q62231 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six1Q62231 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six1Q62231 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six1Q62231 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Six1Q62231 Gm12922-201ENSMUST00000120626 809 ntBASIC19.9■□□□□ 0.78
Six1Q62231 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Six1Q62231 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six1Q62231 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six1Q62231 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Six1Q62231 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six1Q62231 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six1Q62231 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six1Q62231 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.9■□□□□ 0.78
Six1Q62231 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Six1Q62231 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.89■□□□□ 0.77
Six1Q62231 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Six1Q62231 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.89■□□□□ 0.77
Six1Q62231 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.89■□□□□ 0.77
Six1Q62231 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Six1Q62231 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six1Q62231 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Six1Q62231 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six1Q62231 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.88■□□□□ 0.77
Six1Q62231 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
Six1Q62231 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six1Q62231 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Six1Q62231 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.87■□□□□ 0.77
Six1Q62231 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six1Q62231 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six1Q62231 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six1Q62231 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six1Q62231 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six1Q62231 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six1Q62231 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six1Q62231 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Six1Q62231 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six1Q62231 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Six1Q62231 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six1Q62231 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Six1Q62231 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six1Q62231 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six1Q62231 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Six1Q62231 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Six1Q62231 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six1Q62231 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Six1Q62231 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Six1Q62231 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Six1Q62231 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.86■□□□□ 0.77
Six1Q62231 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six1Q62231 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Six1Q62231 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.85■□□□□ 0.77
Six1Q62231 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six1Q62231 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six1Q62231 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six1Q62231 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six1Q62231 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms