Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1eQ61290 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1eQ61290 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1eQ61290 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.2■□□□□ 0.66
Cacna1eQ61290 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cacna1eQ61290 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1eQ61290 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1eQ61290 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1eQ61290 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1eQ61290 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cacna1eQ61290 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.19■□□□□ 0.66
Cacna1eQ61290 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1eQ61290 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1eQ61290 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1eQ61290 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1eQ61290 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Gm22240-201ENSMUST00000175225 82 ntBASIC19.18■□□□□ 0.66
Cacna1eQ61290 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cacna1eQ61290 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1eQ61290 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1eQ61290 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cacna1eQ61290 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1eQ61290 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1eQ61290 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1eQ61290 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1eQ61290 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1eQ61290 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.17■□□□□ 0.66
Cacna1eQ61290 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1eQ61290 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1eQ61290 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.16■□□□□ 0.66
Cacna1eQ61290 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.16■□□□□ 0.66
Cacna1eQ61290 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1eQ61290 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1eQ61290 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1eQ61290 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1eQ61290 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cacna1eQ61290 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cacna1eQ61290 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.16■□□□□ 0.66
Cacna1eQ61290 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1eQ61290 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.15■□□□□ 0.66
Cacna1eQ61290 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1eQ61290 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1eQ61290 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna1eQ61290 Gm13168-201ENSMUST00000121771 632 ntBASIC19.14■□□□□ 0.66
Cacna1eQ61290 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.14■□□□□ 0.66
Cacna1eQ61290 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.14■□□□□ 0.66
Cacna1eQ61290 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1eQ61290 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.14■□□□□ 0.65
Cacna1eQ61290 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.14■□□□□ 0.65
Cacna1eQ61290 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1eQ61290 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1eQ61290 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1eQ61290 Gm7860-201ENSMUST00000121190 879 ntBASIC19.13■□□□□ 0.65
Cacna1eQ61290 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cacna1eQ61290 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.13■□□□□ 0.65
Cacna1eQ61290 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Cacna1eQ61290 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1eQ61290 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1eQ61290 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cacna1eQ61290 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1eQ61290 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.13■□□□□ 0.65
Cacna1eQ61290 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
Cacna1eQ61290 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms