Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hif1aQ61221 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hif1aQ61221 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hif1aQ61221 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hif1aQ61221 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hif1aQ61221 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hif1aQ61221 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.5■□□□□ 0.71
Hif1aQ61221 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hif1aQ61221 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
Hif1aQ61221 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.5■□□□□ 0.71
Hif1aQ61221 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.5■□□□□ 0.71
Hif1aQ61221 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Hif1aQ61221 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hif1aQ61221 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hif1aQ61221 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hif1aQ61221 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hif1aQ61221 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hif1aQ61221 Gm7417-201ENSMUST00000192950 473 ntBASIC19.49■□□□□ 0.71
Hif1aQ61221 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.49■□□□□ 0.71
Hif1aQ61221 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Hif1aQ61221 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hif1aQ61221 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hif1aQ61221 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hif1aQ61221 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hif1aQ61221 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hif1aQ61221 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.48■□□□□ 0.71
Hif1aQ61221 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.48■□□□□ 0.71
Hif1aQ61221 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hif1aQ61221 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hif1aQ61221 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hif1aQ61221 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hif1aQ61221 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.47■□□□□ 0.71
Hif1aQ61221 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Hif1aQ61221 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.47■□□□□ 0.71
Hif1aQ61221 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.47■□□□□ 0.71
Hif1aQ61221 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.47■□□□□ 0.71
Hif1aQ61221 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Hif1aQ61221 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hif1aQ61221 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.46■□□□□ 0.71
Hif1aQ61221 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hif1aQ61221 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hif1aQ61221 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hif1aQ61221 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Hif1aQ61221 Gm9959-201ENSMUST00000068277 390 ntBASIC19.46■□□□□ 0.71
Hif1aQ61221 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hif1aQ61221 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hif1aQ61221 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hif1aQ61221 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hif1aQ61221 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.45■□□□□ 0.7
Hif1aQ61221 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.45■□□□□ 0.7
Hif1aQ61221 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
Hif1aQ61221 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hif1aQ61221 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hif1aQ61221 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Hif1aQ61221 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hif1aQ61221 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hif1aQ61221 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hif1aQ61221 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hif1aQ61221 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hif1aQ61221 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hif1aQ61221 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.43■□□□□ 0.7
Hif1aQ61221 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hif1aQ61221 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hif1aQ61221 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hif1aQ61221 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.43■□□□□ 0.7
Hif1aQ61221 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hif1aQ61221 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms