Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sdf4Q61112 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sdf4Q61112 Gm11421-201ENSMUST00000122124 294 ntBASIC19.64■□□□□ 0.73
Sdf4Q61112 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.64■□□□□ 0.73
Sdf4Q61112 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sdf4Q61112 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdf4Q61112 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.64■□□□□ 0.73
Sdf4Q61112 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.64■□□□□ 0.73
Sdf4Q61112 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sdf4Q61112 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdf4Q61112 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdf4Q61112 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdf4Q61112 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdf4Q61112 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Sdf4Q61112 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sdf4Q61112 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdf4Q61112 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.63■□□□□ 0.73
Sdf4Q61112 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sdf4Q61112 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sdf4Q61112 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sdf4Q61112 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdf4Q61112 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdf4Q61112 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sdf4Q61112 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdf4Q61112 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.62■□□□□ 0.73
Sdf4Q61112 Gm43017-201ENSMUST00000198296 752 ntBASIC19.62■□□□□ 0.73
Sdf4Q61112 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdf4Q61112 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdf4Q61112 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdf4Q61112 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.62■□□□□ 0.73
Sdf4Q61112 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sdf4Q61112 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.62■□□□□ 0.73
Sdf4Q61112 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdf4Q61112 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdf4Q61112 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sdf4Q61112 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdf4Q61112 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sdf4Q61112 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdf4Q61112 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdf4Q61112 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.61■□□□□ 0.73
Sdf4Q61112 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Sdf4Q61112 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sdf4Q61112 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
Sdf4Q61112 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdf4Q61112 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdf4Q61112 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdf4Q61112 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdf4Q61112 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdf4Q61112 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdf4Q61112 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdf4Q61112 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sdf4Q61112 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.6■□□□□ 0.73
Sdf4Q61112 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
Sdf4Q61112 Gm26833-201ENSMUST00000180899 440 ntBASIC19.6■□□□□ 0.73
Sdf4Q61112 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdf4Q61112 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdf4Q61112 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sdf4Q61112 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdf4Q61112 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdf4Q61112 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdf4Q61112 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sdf4Q61112 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.59■□□□□ 0.73
Sdf4Q61112 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdf4Q61112 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Sdf4Q61112 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sdf4Q61112 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdf4Q61112 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.59■□□□□ 0.73
Sdf4Q61112 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sdf4Q61112 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sdf4Q61112 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sdf4Q61112 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sdf4Q61112 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.58■□□□□ 0.72
Sdf4Q61112 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdf4Q61112 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdf4Q61112 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdf4Q61112 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdf4Q61112 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdf4Q61112 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdf4Q61112 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdf4Q61112 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdf4Q61112 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdf4Q61112 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdf4Q61112 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.57■□□□□ 0.72
Sdf4Q61112 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sdf4Q61112 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.57■□□□□ 0.72
Sdf4Q61112 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdf4Q61112 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Sdf4Q61112 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdf4Q61112 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdf4Q61112 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdf4Q61112 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdf4Q61112 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdf4Q61112 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdf4Q61112 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Sdf4Q61112 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Sdf4Q61112 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdf4Q61112 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdf4Q61112 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdf4Q61112 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdf4Q61112 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms