Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Tnfaip3Q60769 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip3Q60769 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip3Q60769 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfaip3Q60769 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.18■□□□□ 0.5
Tnfaip3Q60769 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip3Q60769 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip3Q60769 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tnfaip3Q60769 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip3Q60769 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.18■□□□□ 0.5
Tnfaip3Q60769 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip3Q60769 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip3Q60769 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfaip3Q60769 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Gm42642-201ENSMUST00000200683 355 ntBASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tnfaip3Q60769 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfaip3Q60769 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfaip3Q60769 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tnfaip3Q60769 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfaip3Q60769 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfaip3Q60769 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.14■□□□□ 0.49
Tnfaip3Q60769 Gm42778-201ENSMUST00000199644 553 ntBASIC18.14■□□□□ 0.49
Tnfaip3Q60769 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfaip3Q60769 Gm9988-201ENSMUST00000069786 435 ntBASIC18.14■□□□□ 0.49
Tnfaip3Q60769 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfaip3Q60769 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tnfaip3Q60769 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.14■□□□□ 0.49
Tnfaip3Q60769 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfaip3Q60769 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Tnfaip3Q60769 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfaip3Q60769 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfaip3Q60769 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfaip3Q60769 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.12■□□□□ 0.49
Tnfaip3Q60769 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Tnfaip3Q60769 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.12■□□□□ 0.49
Tnfaip3Q60769 Gm18671-201ENSMUST00000214826 683 ntBASIC18.12■□□□□ 0.49
Tnfaip3Q60769 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfaip3Q60769 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfaip3Q60769 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms