Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-2Q5R1I3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav7-2Q5R1I3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7-2Q5R1I3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-2Q5R1I3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-2Q5R1I3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7-2Q5R1I3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7-2Q5R1I3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7-2Q5R1I3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7-2Q5R1I3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7-2Q5R1I3 Gm13241-201ENSMUST00000094493 780 ntBASIC14.3□□□□□ -0.12
Trav7-2Q5R1I3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7-2Q5R1I3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7-2Q5R1I3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7-2Q5R1I3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7-2Q5R1I3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7-2Q5R1I3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav7-2Q5R1I3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7-2Q5R1I3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav7-2Q5R1I3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7-2Q5R1I3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms