Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.19□□□□□ -0.14
Trav7d-3Q5R1I1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Rps24-207ENSMUST00000224568 714 ntBASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7d-3Q5R1I1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Gm45102-201ENSMUST00000207427 857 ntBASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7d-3Q5R1I1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-3Q5R1I1 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-3Q5R1I1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms