Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav7d-4Q5R1H9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-4Q5R1H9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-4Q5R1H9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-4Q5R1H9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-4Q5R1H9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-4Q5R1H9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-4Q5R1H9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav7d-4Q5R1H9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-4Q5R1H9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-4Q5R1H9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-4Q5R1H9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-4Q5R1H9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms