Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8d-1Q5R1H8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8d-1Q5R1H8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8d-1Q5R1H8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav8d-1Q5R1H8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8d-1Q5R1H8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8d-1Q5R1H8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav8d-1Q5R1H8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8d-1Q5R1H8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trav8d-1Q5R1H8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms