Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5d-4Q5R1F6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5d-4Q5R1F6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5d-4Q5R1F6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Trav5d-4Q5R1F6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.58■□□□□ 0.25
Trav5d-4Q5R1F6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav5d-4Q5R1F6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5d-4Q5R1F6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5d-4Q5R1F6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Trav5d-4Q5R1F6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav5d-4Q5R1F6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trav5d-4Q5R1F6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav5d-4Q5R1F6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5d-4Q5R1F6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5d-4Q5R1F6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5d-4Q5R1F6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5d-4Q5R1F6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5d-4Q5R1F6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Spcs1-204ENSMUST00000226782 949 ntBASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5d-4Q5R1F6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav5d-4Q5R1F6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms