Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Gm27454-201ENSMUST00000185090 204 ntBASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Rnf20Q5DTM8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf20Q5DTM8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.03■■□□□ 1.28
Rnf20Q5DTM8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf20Q5DTM8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.03■■□□□ 1.28
Rnf20Q5DTM8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf20Q5DTM8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.03■■□□□ 1.28
Rnf20Q5DTM8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Rnf20Q5DTM8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf20Q5DTM8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rnf20Q5DTM8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf20Q5DTM8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf20Q5DTM8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf20Q5DTM8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf20Q5DTM8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf20Q5DTM8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf20Q5DTM8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf20Q5DTM8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf20Q5DTM8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Rnf20Q5DTM8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23■■□□□ 1.27
Rnf20Q5DTM8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf20Q5DTM8 Gm8493-201ENSMUST00000196881 489 ntBASIC23■■□□□ 1.27
Rnf20Q5DTM8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rnf20Q5DTM8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23■■□□□ 1.27
Rnf20Q5DTM8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rnf20Q5DTM8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf20Q5DTM8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf20Q5DTM8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf20Q5DTM8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf20Q5DTM8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.99■■□□□ 1.27
Rnf20Q5DTM8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf20Q5DTM8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.99■■□□□ 1.27
Rnf20Q5DTM8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf20Q5DTM8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf20Q5DTM8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf20Q5DTM8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf20Q5DTM8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf20Q5DTM8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Rnf20Q5DTM8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf20Q5DTM8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.96■■□□□ 1.27
Rnf20Q5DTM8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Rnf20Q5DTM8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf20Q5DTM8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC22.96■■□□□ 1.27
Rnf20Q5DTM8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf20Q5DTM8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Rnf20Q5DTM8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Rnf20Q5DTM8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf20Q5DTM8 Smad6-203ENSMUST00000179458 273 ntBASIC22.95■■□□□ 1.26
Rnf20Q5DTM8 Gm43173-201ENSMUST00000202246 593 ntBASIC22.95■■□□□ 1.26
Rnf20Q5DTM8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf20Q5DTM8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.95■■□□□ 1.26
Rnf20Q5DTM8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf20Q5DTM8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf20Q5DTM8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf20Q5DTM8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf20Q5DTM8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf20Q5DTM8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf20Q5DTM8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
Rnf20Q5DTM8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Rnf20Q5DTM8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Rnf20Q5DTM8 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.94■■□□□ 1.26
Rnf20Q5DTM8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf20Q5DTM8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf20Q5DTM8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf20Q5DTM8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf20Q5DTM8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms