Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Urb1Q571H0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Urb1Q571H0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Urb1Q571H0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.81■□□□□ 0.44
Urb1Q571H0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Urb1Q571H0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Urb1Q571H0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Urb1Q571H0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.8■□□□□ 0.44
Urb1Q571H0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Urb1Q571H0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Urb1Q571H0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.8■□□□□ 0.44
Urb1Q571H0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.8■□□□□ 0.44
Urb1Q571H0 Gm26524-201ENSMUST00000192339 390 ntBASIC17.8■□□□□ 0.44
Urb1Q571H0 Gm7977-201ENSMUST00000193787 748 ntBASIC17.8■□□□□ 0.44
Urb1Q571H0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Urb1Q571H0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Urb1Q571H0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Urb1Q571H0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Urb1Q571H0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Urb1Q571H0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Urb1Q571H0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Urb1Q571H0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Urb1Q571H0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Urb1Q571H0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Urb1Q571H0 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.79■□□□□ 0.44
Urb1Q571H0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Urb1Q571H0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Urb1Q571H0 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.79■□□□□ 0.44
Urb1Q571H0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Urb1Q571H0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Urb1Q571H0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Urb1Q571H0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Urb1Q571H0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Urb1Q571H0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Urb1Q571H0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Urb1Q571H0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Urb1Q571H0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.78■□□□□ 0.44
Urb1Q571H0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.78■□□□□ 0.44
Urb1Q571H0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Urb1Q571H0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Urb1Q571H0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Urb1Q571H0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Urb1Q571H0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Urb1Q571H0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Urb1Q571H0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.77■□□□□ 0.44
Urb1Q571H0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Urb1Q571H0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Urb1Q571H0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Urb1Q571H0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Urb1Q571H0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
Urb1Q571H0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Urb1Q571H0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Urb1Q571H0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Urb1Q571H0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.76■□□□□ 0.43
Urb1Q571H0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Urb1Q571H0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Urb1Q571H0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Urb1Q571H0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Urb1Q571H0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.76■□□□□ 0.43
Urb1Q571H0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Urb1Q571H0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Urb1Q571H0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Urb1Q571H0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Urb1Q571H0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.75■□□□□ 0.43
Urb1Q571H0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Urb1Q571H0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Urb1Q571H0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Urb1Q571H0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Urb1Q571H0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Urb1Q571H0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Urb1Q571H0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Urb1Q571H0 Gm38205-201ENSMUST00000192243 258 ntBASIC17.75■□□□□ 0.43
Urb1Q571H0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.75■□□□□ 0.43
Urb1Q571H0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Urb1Q571H0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Urb1Q571H0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.75■□□□□ 0.43
Urb1Q571H0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Urb1Q571H0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.75■□□□□ 0.43
Urb1Q571H0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
Urb1Q571H0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Urb1Q571H0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.75■□□□□ 0.43
Urb1Q571H0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.75■□□□□ 0.43
Urb1Q571H0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Urb1Q571H0 Gm715-201ENSMUST00000117865 831 ntBASIC17.74■□□□□ 0.43
Urb1Q571H0 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.74■□□□□ 0.43
Urb1Q571H0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms