Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lin28bQ45KJ6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lin28bQ45KJ6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Lin28bQ45KJ6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lin28bQ45KJ6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lin28bQ45KJ6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Lin28bQ45KJ6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lin28bQ45KJ6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lin28bQ45KJ6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Lin28bQ45KJ6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.43■□□□□ 0.54
Lin28bQ45KJ6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lin28bQ45KJ6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lin28bQ45KJ6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.43■□□□□ 0.54
Lin28bQ45KJ6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Lin28bQ45KJ6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.43■□□□□ 0.54
Lin28bQ45KJ6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lin28bQ45KJ6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lin28bQ45KJ6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lin28bQ45KJ6 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.42■□□□□ 0.54
Lin28bQ45KJ6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lin28bQ45KJ6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lin28bQ45KJ6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lin28bQ45KJ6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lin28bQ45KJ6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lin28bQ45KJ6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lin28bQ45KJ6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lin28bQ45KJ6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lin28bQ45KJ6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Lin28bQ45KJ6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 AA386476-201ENSMUST00000098781 1665 ntBASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.39■□□□□ 0.53
Lin28bQ45KJ6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Gm12933-201ENSMUST00000120203 872 ntBASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Gm38205-201ENSMUST00000192243 258 ntBASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lin28bQ45KJ6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lin28bQ45KJ6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lin28bQ45KJ6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lin28bQ45KJ6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lin28bQ45KJ6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lin28bQ45KJ6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Lin28bQ45KJ6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.37■□□□□ 0.53
Lin28bQ45KJ6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lin28bQ45KJ6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms