Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim40Q3UWA4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim40Q3UWA4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim40Q3UWA4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim40Q3UWA4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim40Q3UWA4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Gm43566-201ENSMUST00000196851 808 ntBASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Gm5921-201ENSMUST00000075898 882 ntBASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim40Q3UWA4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Gm10399-202ENSMUST00000202768 748 ntBASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 BC021767-201ENSMUST00000126387 1716 ntBASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim40Q3UWA4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim40Q3UWA4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim40Q3UWA4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim40Q3UWA4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim40Q3UWA4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim40Q3UWA4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim40Q3UWA4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim40Q3UWA4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim40Q3UWA4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim40Q3UWA4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim40Q3UWA4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim40Q3UWA4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trim40Q3UWA4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim40Q3UWA4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim40Q3UWA4 Gm13238-201ENSMUST00000117655 780 ntBASIC18.08■□□□□ 0.48
Trim40Q3UWA4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.08■□□□□ 0.48
Trim40Q3UWA4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trim40Q3UWA4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim40Q3UWA4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim40Q3UWA4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim40Q3UWA4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim40Q3UWA4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim40Q3UWA4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim40Q3UWA4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms