Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nlrc4Q3UP24 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nlrc4Q3UP24 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nlrc4Q3UP24 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nlrc4Q3UP24 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nlrc4Q3UP24 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nlrc4Q3UP24 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nlrc4Q3UP24 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nlrc4Q3UP24 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.43■□□□□ 0.86
Nlrc4Q3UP24 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nlrc4Q3UP24 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.41■□□□□ 0.86
Nlrc4Q3UP24 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nlrc4Q3UP24 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.39■□□□□ 0.86
Nlrc4Q3UP24 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nlrc4Q3UP24 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nlrc4Q3UP24 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nlrc4Q3UP24 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nlrc4Q3UP24 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nlrc4Q3UP24 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nlrc4Q3UP24 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.38■□□□□ 0.85
Nlrc4Q3UP24 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Nlrc4Q3UP24 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.38■□□□□ 0.85
Nlrc4Q3UP24 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.38■□□□□ 0.85
Nlrc4Q3UP24 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nlrc4Q3UP24 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nlrc4Q3UP24 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nlrc4Q3UP24 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nlrc4Q3UP24 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Gm18284-201ENSMUST00000172604 624 ntBASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Gm10493-201ENSMUST00000097270 612 ntBASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nlrc4Q3UP24 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nlrc4Q3UP24 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.36■□□□□ 0.85
Nlrc4Q3UP24 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nlrc4Q3UP24 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nlrc4Q3UP24 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms