Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Dio3-201ENSMUST00000097228 1449 ntBASIC23.3■■□□□ 1.32
Col5a2Q3U962 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Col5a2Q3U962 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col5a2Q3U962 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Col5a2Q3U962 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Col5a2Q3U962 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC23.29■■□□□ 1.32
Col5a2Q3U962 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col5a2Q3U962 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col5a2Q3U962 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.28■■□□□ 1.32
Col5a2Q3U962 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col5a2Q3U962 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col5a2Q3U962 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col5a2Q3U962 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col5a2Q3U962 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col5a2Q3U962 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col5a2Q3U962 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col5a2Q3U962 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col5a2Q3U962 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC23.27■■□□□ 1.32
Col5a2Q3U962 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.27■■□□□ 1.32
Col5a2Q3U962 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col5a2Q3U962 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col5a2Q3U962 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col5a2Q3U962 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col5a2Q3U962 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Col5a2Q3U962 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Col5a2Q3U962 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col5a2Q3U962 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col5a2Q3U962 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col5a2Q3U962 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.25■■□□□ 1.31
Col5a2Q3U962 Gm11643-201ENSMUST00000119578 864 ntBASIC23.25■■□□□ 1.31
Col5a2Q3U962 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.25■■□□□ 1.31
Col5a2Q3U962 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col5a2Q3U962 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
Col5a2Q3U962 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.24■■□□□ 1.31
Col5a2Q3U962 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Col5a2Q3U962 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col5a2Q3U962 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col5a2Q3U962 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col5a2Q3U962 Gm10698-201ENSMUST00000182663 604 ntBASIC23.24■■□□□ 1.31
Col5a2Q3U962 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.24■■□□□ 1.31
Col5a2Q3U962 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.23■■□□□ 1.31
Col5a2Q3U962 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.23■■□□□ 1.31
Col5a2Q3U962 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col5a2Q3U962 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col5a2Q3U962 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col5a2Q3U962 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Col5a2Q3U962 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC23.23■■□□□ 1.31
Col5a2Q3U962 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col5a2Q3U962 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col5a2Q3U962 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col5a2Q3U962 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col5a2Q3U962 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Col5a2Q3U962 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col5a2Q3U962 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col5a2Q3U962 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
Col5a2Q3U962 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Col5a2Q3U962 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col5a2Q3U962 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.22■■□□□ 1.31
Col5a2Q3U962 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Col5a2Q3U962 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col5a2Q3U962 Gm15565-201ENSMUST00000118890 427 ntBASIC23.21■■□□□ 1.31
Col5a2Q3U962 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col5a2Q3U962 Arhgef33-211ENSMUST00000225658 473 ntBASIC23.21■■□□□ 1.31
Col5a2Q3U962 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
Col5a2Q3U962 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.21■■□□□ 1.31
Col5a2Q3U962 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col5a2Q3U962 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col5a2Q3U962 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col5a2Q3U962 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.2■■□□□ 1.31
Col5a2Q3U962 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.31
Col5a2Q3U962 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.2■■□□□ 1.3
Col5a2Q3U962 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col5a2Q3U962 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col5a2Q3U962 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col5a2Q3U962 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.19■■□□□ 1.3
Col5a2Q3U962 Gm7860-201ENSMUST00000121190 879 ntBASIC23.19■■□□□ 1.3
Col5a2Q3U962 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
Col5a2Q3U962 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Col5a2Q3U962 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.19■■□□□ 1.3
Col5a2Q3U962 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms