Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 AA386476-201ENSMUST00000098781 1665 ntBASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrc28Q3TX51 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc28Q3TX51 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc28Q3TX51 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc28Q3TX51 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.38■□□□□ 0.53
Lrrc28Q3TX51 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.38■□□□□ 0.53
Lrrc28Q3TX51 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lrrc28Q3TX51 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrc28Q3TX51 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.37■□□□□ 0.53
Lrrc28Q3TX51 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc28Q3TX51 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc28Q3TX51 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc28Q3TX51 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc28Q3TX51 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrc28Q3TX51 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrc28Q3TX51 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrc28Q3TX51 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc28Q3TX51 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc28Q3TX51 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.33■□□□□ 0.52
Lrrc28Q3TX51 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.33■□□□□ 0.52
Lrrc28Q3TX51 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc28Q3TX51 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc28Q3TX51 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc28Q3TX51 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrc28Q3TX51 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc28Q3TX51 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc28Q3TX51 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc28Q3TX51 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc28Q3TX51 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Lrrc28Q3TX51 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc28Q3TX51 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrc28Q3TX51 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lrrc28Q3TX51 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lrrc28Q3TX51 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrc28Q3TX51 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc28Q3TX51 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc28Q3TX51 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc28Q3TX51 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc28Q3TX51 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.3■□□□□ 0.52
Lrrc28Q3TX51 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.3■□□□□ 0.52
Lrrc28Q3TX51 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.3■□□□□ 0.52
Lrrc28Q3TX51 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lrrc28Q3TX51 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms