Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fndc4Q3TR08 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Fndc4Q3TR08 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.42■□□□□ 0.22
Fndc4Q3TR08 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fndc4Q3TR08 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fndc4Q3TR08 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.42■□□□□ 0.22
Fndc4Q3TR08 Rarb-207ENSMUST00000225921 2756 ntBASIC16.42■□□□□ 0.22
Fndc4Q3TR08 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fndc4Q3TR08 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fndc4Q3TR08 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fndc4Q3TR08 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Fndc4Q3TR08 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fndc4Q3TR08 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fndc4Q3TR08 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fndc4Q3TR08 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.38■□□□□ 0.21
Fndc4Q3TR08 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.37■□□□□ 0.21
Fndc4Q3TR08 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.37■□□□□ 0.21
Fndc4Q3TR08 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Fndc4Q3TR08 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms