Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pkd1l3Q2EG98 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pkd1l3Q2EG98 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkd1l3Q2EG98 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pkd1l3Q2EG98 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pkd1l3Q2EG98 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.41■□□□□ 0.38
Pkd1l3Q2EG98 Gm27011-201ENSMUST00000182352 972 ntBASIC17.41■□□□□ 0.38
Pkd1l3Q2EG98 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkd1l3Q2EG98 AA386476-201ENSMUST00000098781 1665 ntBASIC17.41■□□□□ 0.38
Pkd1l3Q2EG98 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pkd1l3Q2EG98 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 Gm7514-201ENSMUST00000209475 934 ntBASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pkd1l3Q2EG98 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkd1l3Q2EG98 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pkd1l3Q2EG98 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pkd1l3Q2EG98 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pkd1l3Q2EG98 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pkd1l3Q2EG98 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pkd1l3Q2EG98 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pkd1l3Q2EG98 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pkd1l3Q2EG98 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pkd1l3Q2EG98 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pkd1l3Q2EG98 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pkd1l3Q2EG98 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pkd1l3Q2EG98 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pkd1l3Q2EG98 Gm13146-201ENSMUST00000118508 780 ntBASIC17.33■□□□□ 0.37
Pkd1l3Q2EG98 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Pkd1l3Q2EG98 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Pkd1l3Q2EG98 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms