Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd3Q0EEE2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd3Q0EEE2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd3Q0EEE2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd3Q0EEE2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Gm22238-201ENSMUST00000175222 88 ntBASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd3Q0EEE2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ptchd3Q0EEE2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd3Q0EEE2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Gm9870-201ENSMUST00000063874 645 ntBASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd3Q0EEE2 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.58■□□□□ 0.57
Ptchd3Q0EEE2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ptchd3Q0EEE2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ptchd3Q0EEE2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ptchd3Q0EEE2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ptchd3Q0EEE2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd3Q0EEE2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.58■□□□□ 0.56
Ptchd3Q0EEE2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd3Q0EEE2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd3Q0EEE2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd3Q0EEE2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd3Q0EEE2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd3Q0EEE2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.58■□□□□ 0.56
Ptchd3Q0EEE2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd3Q0EEE2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ptchd3Q0EEE2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms