Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hspg2Q05793 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hspg2Q05793 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hspg2Q05793 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hspg2Q05793 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.51□□□□□ -0.09
Hspg2Q05793 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hspg2Q05793 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.51□□□□□ -0.09
Hspg2Q05793 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hspg2Q05793 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hspg2Q05793 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.51□□□□□ -0.09
Hspg2Q05793 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.51□□□□□ -0.09
Hspg2Q05793 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.51□□□□□ -0.09
Hspg2Q05793 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Hspg2Q05793 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Hspg2Q05793 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.5□□□□□ -0.09
Hspg2Q05793 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hspg2Q05793 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Gm17641-201ENSMUST00000166328 2350 ntBASIC14.49□□□□□ -0.09
Hspg2Q05793 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.49□□□□□ -0.09
Hspg2Q05793 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.49□□□□□ -0.09
Hspg2Q05793 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Hspg2Q05793 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Hspg2Q05793 Gm7290-201ENSMUST00000104990 617 ntBASIC14.49□□□□□ -0.09
Hspg2Q05793 Gm12918-201ENSMUST00000120234 636 ntBASIC14.49□□□□□ -0.09
Hspg2Q05793 Gm15710-201ENSMUST00000121821 636 ntBASIC14.49□□□□□ -0.09
Hspg2Q05793 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.49□□□□□ -0.09
Hspg2Q05793 Gm5075-201ENSMUST00000196916 622 ntBASIC14.49□□□□□ -0.09
Hspg2Q05793 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.49□□□□□ -0.09
Hspg2Q05793 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.49□□□□□ -0.09
Hspg2Q05793 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Hspg2Q05793 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.49□□□□□ -0.09
Hspg2Q05793 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.49□□□□□ -0.09
Hspg2Q05793 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hspg2Q05793 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.48□□□□□ -0.09
Hspg2Q05793 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.48□□□□□ -0.09
Hspg2Q05793 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Hspg2Q05793 Gm38205-201ENSMUST00000192243 258 ntBASIC14.48□□□□□ -0.09
Hspg2Q05793 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hspg2Q05793 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.47□□□□□ -0.09
Hspg2Q05793 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Hspg2Q05793 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hspg2Q05793 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.47□□□□□ -0.09
Hspg2Q05793 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hspg2Q05793 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hspg2Q05793 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.46□□□□□ -0.09
Hspg2Q05793 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.46□□□□□ -0.09
Hspg2Q05793 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hspg2Q05793 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hspg2Q05793 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hspg2Q05793 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hspg2Q05793 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hspg2Q05793 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hspg2Q05793 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hspg2Q05793 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Hspg2Q05793 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Hspg2Q05793 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hspg2Q05793 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms