Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Nkx2-3P97334 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Nkx2-3P97334 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Nkx2-3P97334 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Nkx2-3P97334 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC24.72■■□□□ 1.55
Nkx2-3P97334 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC24.71■■□□□ 1.55
Nkx2-3P97334 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Nkx2-3P97334 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nkx2-3P97334 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nkx2-3P97334 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nkx2-3P97334 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nkx2-3P97334 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nkx2-3P97334 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Nkx2-3P97334 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nkx2-3P97334 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Nkx2-3P97334 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Nkx2-3P97334 Gm7860-201ENSMUST00000121190 879 ntBASIC24.7■■□□□ 1.54
Nkx2-3P97334 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Nkx2-3P97334 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Nkx2-3P97334 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Nkx2-3P97334 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.7■■□□□ 1.54
Nkx2-3P97334 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Nkx2-3P97334 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Nkx2-3P97334 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nkx2-3P97334 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC24.69■■□□□ 1.54
Nkx2-3P97334 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nkx2-3P97334 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Nkx2-3P97334 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nkx2-3P97334 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nkx2-3P97334 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Nkx2-3P97334 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Nkx2-3P97334 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Nkx2-3P97334 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Nkx2-3P97334 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Nkx2-3P97334 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Nkx2-3P97334 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Nkx2-3P97334 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Nkx2-3P97334 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.67■■□□□ 1.54
Nkx2-3P97334 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Nkx2-3P97334 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC24.67■■□□□ 1.54
Nkx2-3P97334 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Nkx2-3P97334 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC24.67■■□□□ 1.54
Nkx2-3P97334 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Nkx2-3P97334 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Nkx2-3P97334 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nkx2-3P97334 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nkx2-3P97334 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Nkx2-3P97334 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nkx2-3P97334 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Nkx2-3P97334 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Nkx2-3P97334 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC24.66■■□□□ 1.54
Nkx2-3P97334 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.66■■□□□ 1.54
Nkx2-3P97334 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Nkx2-3P97334 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nkx2-3P97334 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nkx2-3P97334 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nkx2-3P97334 Gm7290-201ENSMUST00000104990 617 ntBASIC24.65■■□□□ 1.54
Nkx2-3P97334 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Nkx2-3P97334 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Nkx2-3P97334 Gm12918-201ENSMUST00000120234 636 ntBASIC24.65■■□□□ 1.54
Nkx2-3P97334 Gm15710-201ENSMUST00000121821 636 ntBASIC24.65■■□□□ 1.54
Nkx2-3P97334 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC24.65■■□□□ 1.54
Nkx2-3P97334 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.65■■□□□ 1.54
Nkx2-3P97334 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Nkx2-3P97334 Gm6211-202ENSMUST00000167849 925 ntBASIC24.65■■□□□ 1.54
Nkx2-3P97334 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC24.65■■□□□ 1.54
Nkx2-3P97334 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC24.65■■□□□ 1.54
Nkx2-3P97334 Gm5075-201ENSMUST00000196916 622 ntBASIC24.65■■□□□ 1.54
Nkx2-3P97334 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nkx2-3P97334 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC24.65■■□□□ 1.54
Nkx2-3P97334 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC24.65■■□□□ 1.54
Nkx2-3P97334 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nkx2-3P97334 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nkx2-3P97334 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Nkx2-3P97334 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Nkx2-3P97334 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Nkx2-3P97334 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Nkx2-3P97334 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Nkx2-3P97334 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nkx2-3P97334 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Nkx2-3P97334 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nkx2-3P97334 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Nkx2-3P97334 Gm20049-201ENSMUST00000219950 730 ntBASIC24.63■■□□□ 1.53
Nkx2-3P97334 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Nkx2-3P97334 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Nkx2-3P97334 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Nkx2-3P97334 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nkx2-3P97334 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nkx2-3P97334 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Nkx2-3P97334 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nkx2-3P97334 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nkx2-3P97334 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Nkx2-3P97334 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
Nkx2-3P97334 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nkx2-3P97334 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC24.61■■□□□ 1.53
Nkx2-3P97334 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Nkx2-3P97334 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Nkx2-3P97334 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nkx2-3P97334 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nkx2-3P97334 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms