Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.82■□□□□ 0.44
SgcdP82347 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.82■□□□□ 0.44
SgcdP82347 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.82■□□□□ 0.44
SgcdP82347 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcdP82347 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SgcdP82347 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.81■□□□□ 0.44
SgcdP82347 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.81■□□□□ 0.44
SgcdP82347 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.81■□□□□ 0.44
SgcdP82347 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SgcdP82347 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcdP82347 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.81■□□□□ 0.44
SgcdP82347 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.8■□□□□ 0.44
SgcdP82347 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcdP82347 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SgcdP82347 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcdP82347 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcdP82347 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcdP82347 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SgcdP82347 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcdP82347 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcdP82347 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.8■□□□□ 0.44
SgcdP82347 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.8■□□□□ 0.44
SgcdP82347 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcdP82347 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SgcdP82347 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcdP82347 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcdP82347 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SgcdP82347 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SgcdP82347 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.79■□□□□ 0.44
SgcdP82347 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SgcdP82347 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SgcdP82347 Gm22238-201ENSMUST00000175222 88 ntBASIC17.79■□□□□ 0.44
SgcdP82347 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcdP82347 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SgcdP82347 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcdP82347 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
SgcdP82347 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcdP82347 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcdP82347 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcdP82347 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.79■□□□□ 0.44
SgcdP82347 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcdP82347 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcdP82347 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SgcdP82347 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcdP82347 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SgcdP82347 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcdP82347 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcdP82347 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SgcdP82347 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.78■□□□□ 0.44
SgcdP82347 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SgcdP82347 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcdP82347 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcdP82347 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgcdP82347 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.77■□□□□ 0.44
SgcdP82347 Gm40881-201ENSMUST00000223397 166 ntBASIC17.77■□□□□ 0.44
SgcdP82347 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.77■□□□□ 0.44
SgcdP82347 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.77■□□□□ 0.44
SgcdP82347 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgcdP82347 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SgcdP82347 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SgcdP82347 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SgcdP82347 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SgcdP82347 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SgcdP82347 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SgcdP82347 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SgcdP82347 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SgcdP82347 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.76■□□□□ 0.43
SgcdP82347 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcdP82347 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcdP82347 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SgcdP82347 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcdP82347 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcdP82347 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SgcdP82347 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms