Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Msx3P70354 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.88■□□□□ 0.77
Msx3P70354 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.88■□□□□ 0.77
Msx3P70354 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.88■□□□□ 0.77
Msx3P70354 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Gm21956-201ENSMUST00000179946 522 ntBASIC19.88■□□□□ 0.77
Msx3P70354 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.88■□□□□ 0.77
Msx3P70354 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Msx3P70354 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx3P70354 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msx3P70354 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Msx3P70354 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msx3P70354 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msx3P70354 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.87■□□□□ 0.77
Msx3P70354 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msx3P70354 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Msx3P70354 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msx3P70354 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Msx3P70354 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msx3P70354 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msx3P70354 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msx3P70354 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msx3P70354 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.87■□□□□ 0.77
Msx3P70354 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Msx3P70354 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx3P70354 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx3P70354 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx3P70354 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msx3P70354 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msx3P70354 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msx3P70354 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Msx3P70354 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx3P70354 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msx3P70354 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx3P70354 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msx3P70354 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msx3P70354 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.85■□□□□ 0.77
Msx3P70354 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Msx3P70354 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msx3P70354 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Msx3P70354 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Msx3P70354 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msx3P70354 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msx3P70354 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Msx3P70354 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msx3P70354 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msx3P70354 Gm12251-201ENSMUST00000117893 792 ntBASIC19.84■□□□□ 0.77
Msx3P70354 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.84■□□□□ 0.77
Msx3P70354 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
Msx3P70354 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msx3P70354 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msx3P70354 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msx3P70354 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Msx3P70354 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msx3P70354 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Msx3P70354 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Msx3P70354 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msx3P70354 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Msx3P70354 Iqck-206ENSMUST00000208658 2891 ntBASIC19.83■□□□□ 0.77
Msx3P70354 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msx3P70354 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.83■□□□□ 0.77
Msx3P70354 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msx3P70354 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.83■□□□□ 0.77
Msx3P70354 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.83■□□□□ 0.77
Msx3P70354 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Msx3P70354 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.83■□□□□ 0.77
Msx3P70354 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msx3P70354 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msx3P70354 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msx3P70354 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msx3P70354 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msx3P70354 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msx3P70354 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msx3P70354 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx3P70354 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx3P70354 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx3P70354 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx3P70354 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Msx3P70354 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx3P70354 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.82■□□□□ 0.76
Msx3P70354 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx3P70354 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx3P70354 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Msx3P70354 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msx3P70354 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Msx3P70354 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Msx3P70354 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msx3P70354 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Msx3P70354 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms