Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six5P70178 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six5P70178 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Six5P70178 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.09■□□□□ 0.49
Six5P70178 Gm26833-201ENSMUST00000180899 440 ntBASIC18.09■□□□□ 0.49
Six5P70178 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six5P70178 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Six5P70178 Gm43017-201ENSMUST00000198296 752 ntBASIC18.09■□□□□ 0.49
Six5P70178 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six5P70178 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.09■□□□□ 0.49
Six5P70178 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six5P70178 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Six5P70178 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.08■□□□□ 0.48
Six5P70178 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.08■□□□□ 0.48
Six5P70178 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six5P70178 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six5P70178 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.08■□□□□ 0.48
Six5P70178 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six5P70178 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six5P70178 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six5P70178 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six5P70178 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six5P70178 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Six5P70178 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six5P70178 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six5P70178 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six5P70178 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six5P70178 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Six5P70178 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Six5P70178 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six5P70178 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six5P70178 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Six5P70178 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six5P70178 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six5P70178 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six5P70178 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.06■□□□□ 0.48
Six5P70178 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Six5P70178 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six5P70178 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Six5P70178 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six5P70178 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six5P70178 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six5P70178 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.05■□□□□ 0.48
Six5P70178 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Six5P70178 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Six5P70178 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Six5P70178 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six5P70178 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six5P70178 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.05■□□□□ 0.48
Six5P70178 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six5P70178 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Six5P70178 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six5P70178 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six5P70178 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six5P70178 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Six5P70178 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Six5P70178 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six5P70178 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six5P70178 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Six5P70178 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Six5P70178 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six5P70178 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six5P70178 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six5P70178 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Six5P70178 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six5P70178 Gm27801-201ENSMUST00000184174 223 ntBASIC18.03■□□□□ 0.48
Six5P70178 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.03■□□□□ 0.48
Six5P70178 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.03■□□□□ 0.48
Six5P70178 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six5P70178 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six5P70178 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Six5P70178 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six5P70178 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Six5P70178 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.02■□□□□ 0.48
Six5P70178 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.02■□□□□ 0.48
Six5P70178 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six5P70178 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Six5P70178 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six5P70178 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Six5P70178 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six5P70178 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six5P70178 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six5P70178 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Six5P70178 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Six5P70178 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Six5P70178 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.02■□□□□ 0.47
Six5P70178 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Six5P70178 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.01■□□□□ 0.47
Six5P70178 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six5P70178 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six5P70178 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six5P70178 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Six5P70178 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six5P70178 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six5P70178 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six5P70178 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six5P70178 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.01■□□□□ 0.47
Six5P70178 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.01■□□□□ 0.47
Six5P70178 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Six5P70178 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms