Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Crnkl1P63154 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Crnkl1P63154 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.08■□□□□ 0.64
Crnkl1P63154 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Crnkl1P63154 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Crnkl1P63154 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Crnkl1P63154 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Crnkl1P63154 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Crnkl1P63154 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Crnkl1P63154 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Crnkl1P63154 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.07■□□□□ 0.64
Crnkl1P63154 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Crnkl1P63154 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Crnkl1P63154 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crnkl1P63154 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Crnkl1P63154 Grk6-206ENSMUST00000224995 2971 ntBASIC19.07■□□□□ 0.64
Crnkl1P63154 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.07■□□□□ 0.64
Crnkl1P63154 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Crnkl1P63154 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crnkl1P63154 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crnkl1P63154 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crnkl1P63154 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crnkl1P63154 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.06■□□□□ 0.64
Crnkl1P63154 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Crnkl1P63154 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crnkl1P63154 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Crnkl1P63154 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crnkl1P63154 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crnkl1P63154 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crnkl1P63154 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Crnkl1P63154 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Crnkl1P63154 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Crnkl1P63154 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.05■□□□□ 0.64
Crnkl1P63154 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Crnkl1P63154 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Crnkl1P63154 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Crnkl1P63154 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Crnkl1P63154 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Crnkl1P63154 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Crnkl1P63154 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Crnkl1P63154 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Crnkl1P63154 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Crnkl1P63154 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Crnkl1P63154 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Crnkl1P63154 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Crnkl1P63154 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Crnkl1P63154 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.04■□□□□ 0.64
Crnkl1P63154 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.04■□□□□ 0.64
Crnkl1P63154 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Crnkl1P63154 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Crnkl1P63154 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.04■□□□□ 0.64
Crnkl1P63154 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Crnkl1P63154 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Crnkl1P63154 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Crnkl1P63154 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.03■□□□□ 0.64
Crnkl1P63154 Rps24-207ENSMUST00000224568 714 ntBASIC19.03■□□□□ 0.64
Crnkl1P63154 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.03■□□□□ 0.64
Crnkl1P63154 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Crnkl1P63154 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.02■□□□□ 0.64
Crnkl1P63154 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Crnkl1P63154 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Crnkl1P63154 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Crnkl1P63154 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Crnkl1P63154 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.01■□□□□ 0.63
Crnkl1P63154 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Crnkl1P63154 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Crnkl1P63154 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Crnkl1P63154 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Crnkl1P63154 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms