Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pdx1P52946 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdx1P52946 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdx1P52946 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdx1P52946 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdx1P52946 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pdx1P52946 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.18■□□□□ 0.66
Pdx1P52946 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdx1P52946 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pdx1P52946 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdx1P52946 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.17■□□□□ 0.66
Pdx1P52946 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdx1P52946 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdx1P52946 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pdx1P52946 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pdx1P52946 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.16■□□□□ 0.66
Pdx1P52946 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.16■□□□□ 0.66
Pdx1P52946 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdx1P52946 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.16■□□□□ 0.66
Pdx1P52946 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdx1P52946 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdx1P52946 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pdx1P52946 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pdx1P52946 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdx1P52946 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdx1P52946 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdx1P52946 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdx1P52946 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdx1P52946 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdx1P52946 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.15■□□□□ 0.66
Pdx1P52946 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdx1P52946 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdx1P52946 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Pdx1P52946 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdx1P52946 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdx1P52946 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Pdx1P52946 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pdx1P52946 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pdx1P52946 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pdx1P52946 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pdx1P52946 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdx1P52946 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pdx1P52946 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.14■□□□□ 0.65
Pdx1P52946 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.14■□□□□ 0.65
Pdx1P52946 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdx1P52946 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.14■□□□□ 0.65
Pdx1P52946 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdx1P52946 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.14■□□□□ 0.65
Pdx1P52946 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdx1P52946 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Pdx1P52946 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.13■□□□□ 0.65
Pdx1P52946 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pdx1P52946 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdx1P52946 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdx1P52946 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdx1P52946 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdx1P52946 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdx1P52946 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.12■□□□□ 0.65
Pdx1P52946 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdx1P52946 Gm43060-201ENSMUST00000200621 289 ntBASIC19.12■□□□□ 0.65
Pdx1P52946 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.12■□□□□ 0.65
Pdx1P52946 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pdx1P52946 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Pdx1P52946 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.11■□□□□ 0.65
Pdx1P52946 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.11■□□□□ 0.65
Pdx1P52946 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdx1P52946 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdx1P52946 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Pdx1P52946 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pdx1P52946 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pdx1P52946 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdx1P52946 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pdx1P52946 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdx1P52946 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdx1P52946 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pdx1P52946 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pdx1P52946 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pdx1P52946 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms