Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx3P50481 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx3P50481 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
Lhx3P50481 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx3P50481 Gm9988-201ENSMUST00000069786 435 ntBASIC19.73■□□□□ 0.75
Lhx3P50481 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx3P50481 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx3P50481 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx3P50481 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Lhx3P50481 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx3P50481 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx3P50481 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx3P50481 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx3P50481 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx3P50481 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.72■□□□□ 0.75
Lhx3P50481 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx3P50481 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Lhx3P50481 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx3P50481 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Lhx3P50481 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.71■□□□□ 0.75
Lhx3P50481 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx3P50481 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx3P50481 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Lhx3P50481 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Lhx3P50481 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx3P50481 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx3P50481 Reep4-203ENSMUST00000226563 1444 ntBASIC19.7■□□□□ 0.74
Lhx3P50481 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.7■□□□□ 0.74
Lhx3P50481 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx3P50481 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.7■□□□□ 0.74
Lhx3P50481 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.7■□□□□ 0.74
Lhx3P50481 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx3P50481 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx3P50481 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Lhx3P50481 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx3P50481 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx3P50481 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx3P50481 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx3P50481 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx3P50481 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx3P50481 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx3P50481 Gm10033-202ENSMUST00000211874 928 ntBASIC19.69■□□□□ 0.74
Lhx3P50481 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Lhx3P50481 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.69■□□□□ 0.74
Lhx3P50481 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Lhx3P50481 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
Lhx3P50481 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx3P50481 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx3P50481 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx3P50481 Gm42642-201ENSMUST00000200683 355 ntBASIC19.68■□□□□ 0.74
Lhx3P50481 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.68■□□□□ 0.74
Lhx3P50481 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx3P50481 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx3P50481 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx3P50481 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx3P50481 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx3P50481 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx3P50481 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx3P50481 Gm26571-201ENSMUST00000181399 666 ntBASIC19.67■□□□□ 0.74
Lhx3P50481 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx3P50481 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx3P50481 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.67■□□□□ 0.74
Lhx3P50481 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx3P50481 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx3P50481 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx3P50481 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx3P50481 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx3P50481 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Lhx3P50481 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Lhx3P50481 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx3P50481 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx3P50481 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx3P50481 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx3P50481 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lhx3P50481 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx3P50481 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.66■□□□□ 0.74
Lhx3P50481 Gm38205-201ENSMUST00000192243 258 ntBASIC19.66■□□□□ 0.74
Lhx3P50481 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Lhx3P50481 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Lhx3P50481 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Lhx3P50481 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx3P50481 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Lhx3P50481 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx3P50481 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx3P50481 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.65■□□□□ 0.74
Lhx3P50481 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.65■□□□□ 0.74
Lhx3P50481 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.65■□□□□ 0.74
Lhx3P50481 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx3P50481 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx3P50481 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms