Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GdnfP48540 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GdnfP48540 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GdnfP48540 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GdnfP48540 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GdnfP48540 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
GdnfP48540 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GdnfP48540 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.86■□□□□ 0.29
GdnfP48540 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.86■□□□□ 0.29
GdnfP48540 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.86■□□□□ 0.29
GdnfP48540 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GdnfP48540 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GdnfP48540 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GdnfP48540 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GdnfP48540 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GdnfP48540 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GdnfP48540 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
GdnfP48540 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GdnfP48540 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GdnfP48540 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GdnfP48540 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GdnfP48540 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GdnfP48540 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GdnfP48540 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GdnfP48540 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GdnfP48540 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
GdnfP48540 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GdnfP48540 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GdnfP48540 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.84■□□□□ 0.29
GdnfP48540 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GdnfP48540 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GdnfP48540 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GdnfP48540 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.84■□□□□ 0.29
GdnfP48540 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GdnfP48540 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.84■□□□□ 0.29
GdnfP48540 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GdnfP48540 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
GdnfP48540 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
GdnfP48540 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.84■□□□□ 0.29
GdnfP48540 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GdnfP48540 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GdnfP48540 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.83■□□□□ 0.28
GdnfP48540 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.83■□□□□ 0.28
GdnfP48540 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GdnfP48540 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GdnfP48540 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GdnfP48540 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GdnfP48540 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GdnfP48540 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GdnfP48540 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
GdnfP48540 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
GdnfP48540 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GdnfP48540 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.82■□□□□ 0.28
GdnfP48540 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.82■□□□□ 0.28
GdnfP48540 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GdnfP48540 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GdnfP48540 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GdnfP48540 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GdnfP48540 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GdnfP48540 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
GdnfP48540 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.81■□□□□ 0.28
GdnfP48540 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.81■□□□□ 0.28
GdnfP48540 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
GdnfP48540 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GdnfP48540 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms