Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13P47963 Gm27454-201ENSMUST00000185090 204 ntBASIC21.18■□□□□ 0.98
Rpl13P47963 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13P47963 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13P47963 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13P47963 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Rpl13P47963 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13P47963 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13P47963 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13P47963 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13P47963 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13P47963 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl13P47963 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.17■□□□□ 0.98
Rpl13P47963 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl13P47963 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Rpl13P47963 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl13P47963 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.17■□□□□ 0.98
Rpl13P47963 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl13P47963 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.17■□□□□ 0.98
Rpl13P47963 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl13P47963 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl13P47963 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl13P47963 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rpl13P47963 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpl13P47963 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rpl13P47963 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.16■□□□□ 0.98
Rpl13P47963 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.16■□□□□ 0.98
Rpl13P47963 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.16■□□□□ 0.98
Rpl13P47963 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.16■□□□□ 0.98
Rpl13P47963 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rpl13P47963 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rpl13P47963 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpl13P47963 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl13P47963 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rpl13P47963 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl13P47963 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl13P47963 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl13P47963 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpl13P47963 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpl13P47963 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpl13P47963 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rpl13P47963 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl13P47963 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl13P47963 Gm8493-201ENSMUST00000196881 489 ntBASIC21.14■□□□□ 0.97
Rpl13P47963 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl13P47963 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl13P47963 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl13P47963 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl13P47963 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rpl13P47963 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpl13P47963 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpl13P47963 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Rpl13P47963 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.13■□□□□ 0.97
Rpl13P47963 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpl13P47963 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.13■□□□□ 0.97
Rpl13P47963 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpl13P47963 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Rpl13P47963 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpl13P47963 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rpl13P47963 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.13■□□□□ 0.97
Rpl13P47963 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpl13P47963 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpl13P47963 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl13P47963 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl13P47963 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rpl13P47963 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl13P47963 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl13P47963 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl13P47963 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rpl13P47963 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl13P47963 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rpl13P47963 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl13P47963 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl13P47963 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.11■□□□□ 0.97
Rpl13P47963 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.11■□□□□ 0.97
Rpl13P47963 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl13P47963 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl13P47963 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl13P47963 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.11■□□□□ 0.97
Rpl13P47963 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rpl13P47963 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl13P47963 Smad6-203ENSMUST00000179458 273 ntBASIC21.09■□□□□ 0.97
Rpl13P47963 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.09■□□□□ 0.97
Rpl13P47963 Gm43173-201ENSMUST00000202246 593 ntBASIC21.09■□□□□ 0.97
Rpl13P47963 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rpl13P47963 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.09■□□□□ 0.97
Rpl13P47963 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl13P47963 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl13P47963 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl13P47963 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl13P47963 Gm45417-201ENSMUST00000209533 758 ntBASIC21.08■□□□□ 0.97
Rpl13P47963 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl13P47963 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.08■□□□□ 0.96
Rpl13P47963 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpl13P47963 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl13P47963 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl13P47963 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl13P47963 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl13P47963 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.07■□□□□ 0.96
Rpl13P47963 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms