Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rph3aP47708 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rph3aP47708 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.62■□□□□ 0.57
Rph3aP47708 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.62■□□□□ 0.57
Rph3aP47708 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rph3aP47708 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rph3aP47708 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.62■□□□□ 0.57
Rph3aP47708 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rph3aP47708 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rph3aP47708 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.62■□□□□ 0.57
Rph3aP47708 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rph3aP47708 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rph3aP47708 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rph3aP47708 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rph3aP47708 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Rph3aP47708 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rph3aP47708 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rph3aP47708 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rph3aP47708 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rph3aP47708 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rph3aP47708 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rph3aP47708 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rph3aP47708 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rph3aP47708 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rph3aP47708 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.6■□□□□ 0.57
Rph3aP47708 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.6■□□□□ 0.57
Rph3aP47708 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rph3aP47708 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rph3aP47708 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rph3aP47708 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rph3aP47708 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rph3aP47708 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rph3aP47708 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rph3aP47708 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.59■□□□□ 0.57
Rph3aP47708 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rph3aP47708 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Rph3aP47708 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.59■□□□□ 0.57
Rph3aP47708 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rph3aP47708 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rph3aP47708 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Rph3aP47708 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rph3aP47708 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rph3aP47708 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rph3aP47708 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rph3aP47708 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.59■□□□□ 0.57
Rph3aP47708 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rph3aP47708 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rph3aP47708 Smad6-203ENSMUST00000179458 273 ntBASIC18.58■□□□□ 0.56
Rph3aP47708 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rph3aP47708 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rph3aP47708 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rph3aP47708 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rph3aP47708 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rph3aP47708 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rph3aP47708 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rph3aP47708 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.57■□□□□ 0.56
Rph3aP47708 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rph3aP47708 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rph3aP47708 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Rph3aP47708 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rph3aP47708 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rph3aP47708 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.57■□□□□ 0.56
Rph3aP47708 Serp2-204ENSMUST00000228055 705 ntBASIC18.57■□□□□ 0.56
Rph3aP47708 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rph3aP47708 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rph3aP47708 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rph3aP47708 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rph3aP47708 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rph3aP47708 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rph3aP47708 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rph3aP47708 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rph3aP47708 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rph3aP47708 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rph3aP47708 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Rph3aP47708 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.55■□□□□ 0.56
Rph3aP47708 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.55■□□□□ 0.56
Rph3aP47708 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rph3aP47708 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rph3aP47708 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rph3aP47708 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rph3aP47708 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Rph3aP47708 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rph3aP47708 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rph3aP47708 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rph3aP47708 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.54■□□□□ 0.56
Rph3aP47708 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rph3aP47708 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rph3aP47708 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rph3aP47708 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms