Protein–RNA interactions for Protein: P46737

Brcc3, Lys-63-specific deubiquitinase BRCC36, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brcc3P46737 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brcc3P46737 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brcc3P46737 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brcc3P46737 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brcc3P46737 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Brcc3P46737 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brcc3P46737 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brcc3P46737 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brcc3P46737 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Brcc3P46737 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Brcc3P46737 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Brcc3P46737 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Brcc3P46737 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Brcc3P46737 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brcc3P46737 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brcc3P46737 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brcc3P46737 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Brcc3P46737 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Brcc3P46737 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.45■□□□□ 0.86
Brcc3P46737 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brcc3P46737 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.45■□□□□ 0.86
Brcc3P46737 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Brcc3P46737 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.45■□□□□ 0.86
Brcc3P46737 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.44■□□□□ 0.86
Brcc3P46737 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brcc3P46737 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brcc3P46737 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Brcc3P46737 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brcc3P46737 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.44■□□□□ 0.86
Brcc3P46737 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Brcc3P46737 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Brcc3P46737 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brcc3P46737 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brcc3P46737 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brcc3P46737 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brcc3P46737 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Brcc3P46737 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Brcc3P46737 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brcc3P46737 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brcc3P46737 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brcc3P46737 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Brcc3P46737 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brcc3P46737 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Brcc3P46737 Gm13146-201ENSMUST00000118508 780 ntBASIC20.42■□□□□ 0.86
Brcc3P46737 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Brcc3P46737 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.42■□□□□ 0.86
Brcc3P46737 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brcc3P46737 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Brcc3P46737 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Brcc3P46737 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Brcc3P46737 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Brcc3P46737 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.41■□□□□ 0.86
Brcc3P46737 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.41■□□□□ 0.86
Brcc3P46737 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.41■□□□□ 0.86
Brcc3P46737 Gm10602-201ENSMUST00000098239 609 ntBASIC20.41■□□□□ 0.86
Brcc3P46737 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brcc3P46737 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brcc3P46737 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Brcc3P46737 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Brcc3P46737 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Brcc3P46737 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Brcc3P46737 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Brcc3P46737 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.4■□□□□ 0.86
Brcc3P46737 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brcc3P46737 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brcc3P46737 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Brcc3P46737 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brcc3P46737 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brcc3P46737 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Brcc3P46737 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Brcc3P46737 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brcc3P46737 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.39■□□□□ 0.85
Brcc3P46737 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Brcc3P46737 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Brcc3P46737 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brcc3P46737 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brcc3P46737 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brcc3P46737 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brcc3P46737 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.38■□□□□ 0.85
Brcc3P46737 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.38■□□□□ 0.85
Brcc3P46737 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Brcc3P46737 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Brcc3P46737 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brcc3P46737 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brcc3P46737 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brcc3P46737 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Brcc3P46737 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.38■□□□□ 0.85
Brcc3P46737 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brcc3P46737 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.38■□□□□ 0.85
Brcc3P46737 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.38■□□□□ 0.85
Brcc3P46737 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brcc3P46737 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.38■□□□□ 0.85
Brcc3P46737 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.38■□□□□ 0.85
Brcc3P46737 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brcc3P46737 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Brcc3P46737 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brcc3P46737 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brcc3P46737 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brcc3P46737 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brcc3P46737 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms