Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Msh2P43247 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Msh2P43247 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Msh2P43247 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh2P43247 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Msh2P43247 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh2P43247 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Msh2P43247 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Msh2P43247 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh2P43247 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.89■□□□□ 0.77
Msh2P43247 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Msh2P43247 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.88■□□□□ 0.77
Msh2P43247 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.88■□□□□ 0.77
Msh2P43247 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.88■□□□□ 0.77
Msh2P43247 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh2P43247 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Msh2P43247 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Msh2P43247 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.87■□□□□ 0.77
Msh2P43247 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Msh2P43247 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh2P43247 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh2P43247 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh2P43247 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.86■□□□□ 0.77
Msh2P43247 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.86■□□□□ 0.77
Msh2P43247 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh2P43247 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh2P43247 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh2P43247 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.86■□□□□ 0.77
Msh2P43247 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msh2P43247 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh2P43247 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh2P43247 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh2P43247 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh2P43247 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.85■□□□□ 0.77
Msh2P43247 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh2P43247 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.85■□□□□ 0.77
Msh2P43247 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.85■□□□□ 0.77
Msh2P43247 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.85■□□□□ 0.77
Msh2P43247 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh2P43247 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh2P43247 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh2P43247 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh2P43247 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh2P43247 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Msh2P43247 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh2P43247 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh2P43247 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh2P43247 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh2P43247 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Msh2P43247 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Msh2P43247 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Msh2P43247 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh2P43247 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Msh2P43247 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Msh2P43247 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Msh2P43247 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Msh2P43247 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh2P43247 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Msh2P43247 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh2P43247 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh2P43247 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh2P43247 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh2P43247 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh2P43247 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms