Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Gm22240-201ENSMUST00000175225 82 ntBASIC16■□□□□ 0.15
Abca1P41233 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16■□□□□ 0.15
Abca1P41233 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16■□□□□ 0.15
Abca1P41233 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca1P41233 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.99■□□□□ 0.15
Abca1P41233 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca1P41233 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca1P41233 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca1P41233 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca1P41233 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca1P41233 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.99■□□□□ 0.15
Abca1P41233 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Abca1P41233 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.99■□□□□ 0.15
Abca1P41233 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca1P41233 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca1P41233 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca1P41233 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Abca1P41233 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Abca1P41233 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca1P41233 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca1P41233 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca1P41233 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Abca1P41233 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca1P41233 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca1P41233 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
Abca1P41233 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Abca1P41233 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
Abca1P41233 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Abca1P41233 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Abca1P41233 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.97■□□□□ 0.15
Abca1P41233 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Abca1P41233 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.97■□□□□ 0.15
Abca1P41233 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Abca1P41233 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca1P41233 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca1P41233 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Abca1P41233 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca1P41233 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca1P41233 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca1P41233 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.96■□□□□ 0.14
Abca1P41233 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.96■□□□□ 0.14
Abca1P41233 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Abca1P41233 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Abca1P41233 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.95■□□□□ 0.14
Abca1P41233 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.95■□□□□ 0.14
Abca1P41233 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca1P41233 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Abca1P41233 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Abca1P41233 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca1P41233 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca1P41233 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca1P41233 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Abca1P41233 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Abca1P41233 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca1P41233 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Abca1P41233 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.94■□□□□ 0.14
Abca1P41233 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca1P41233 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca1P41233 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca1P41233 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Abca1P41233 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Abca1P41233 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca1P41233 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca1P41233 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca1P41233 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Abca1P41233 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Abca1P41233 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca1P41233 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.94■□□□□ 0.14
Abca1P41233 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca1P41233 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.93■□□□□ 0.14
Abca1P41233 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.93■□□□□ 0.14
Abca1P41233 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca1P41233 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.93■□□□□ 0.14
Abca1P41233 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca1P41233 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Abca1P41233 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca1P41233 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca1P41233 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca1P41233 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca1P41233 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca1P41233 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Abca1P41233 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 278.7 ms