Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.93■□□□□ 0.46
Foxa1P35582 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.93■□□□□ 0.46
Foxa1P35582 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.93■□□□□ 0.46
Foxa1P35582 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Foxa1P35582 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxa1P35582 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxa1P35582 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Foxa1P35582 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Foxa1P35582 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxa1P35582 Notumos-201ENSMUST00000151998 2659 ntBASIC17.92■□□□□ 0.46
Foxa1P35582 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Foxa1P35582 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxa1P35582 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.92■□□□□ 0.46
Foxa1P35582 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Foxa1P35582 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxa1P35582 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxa1P35582 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.91■□□□□ 0.46
Foxa1P35582 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxa1P35582 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxa1P35582 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxa1P35582 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxa1P35582 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.9■□□□□ 0.46
Foxa1P35582 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Foxa1P35582 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Foxa1P35582 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxa1P35582 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.9■□□□□ 0.46
Foxa1P35582 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxa1P35582 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Foxa1P35582 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Foxa1P35582 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.9■□□□□ 0.46
Foxa1P35582 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxa1P35582 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Foxa1P35582 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxa1P35582 Gm43060-201ENSMUST00000200621 289 ntBASIC17.89■□□□□ 0.45
Foxa1P35582 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxa1P35582 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxa1P35582 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxa1P35582 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxa1P35582 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxa1P35582 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxa1P35582 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxa1P35582 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxa1P35582 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxa1P35582 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxa1P35582 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Foxa1P35582 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Foxa1P35582 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Foxa1P35582 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.88■□□□□ 0.45
Foxa1P35582 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.88■□□□□ 0.45
Foxa1P35582 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxa1P35582 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Foxa1P35582 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.88■□□□□ 0.45
Foxa1P35582 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Foxa1P35582 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Foxa1P35582 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxa1P35582 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxa1P35582 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxa1P35582 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Foxa1P35582 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxa1P35582 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Foxa1P35582 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxa1P35582 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxa1P35582 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.87■□□□□ 0.45
Foxa1P35582 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxa1P35582 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.87■□□□□ 0.45
Foxa1P35582 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxa1P35582 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Foxa1P35582 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Foxa1P35582 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Foxa1P35582 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Foxa1P35582 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.86■□□□□ 0.45
Foxa1P35582 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Foxa1P35582 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Foxa1P35582 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxa1P35582 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms