Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.61■□□□□ 0.25
Slc6a1P31648 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.61■□□□□ 0.25
Slc6a1P31648 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a1P31648 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Slc6a1P31648 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a1P31648 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
Slc6a1P31648 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a1P31648 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a1P31648 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.6■□□□□ 0.25
Slc6a1P31648 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a1P31648 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a1P31648 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a1P31648 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a1P31648 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a1P31648 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a1P31648 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a1P31648 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Slc6a1P31648 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Slc6a1P31648 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a1P31648 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Slc6a1P31648 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a1P31648 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a1P31648 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a1P31648 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a1P31648 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a1P31648 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.58■□□□□ 0.24
Slc6a1P31648 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Slc6a1P31648 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a1P31648 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a1P31648 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a1P31648 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a1P31648 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Slc6a1P31648 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a1P31648 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a1P31648 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a1P31648 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Slc6a1P31648 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a1P31648 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.57■□□□□ 0.24
Slc6a1P31648 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Slc6a1P31648 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.57■□□□□ 0.24
Slc6a1P31648 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a1P31648 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc6a1P31648 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a1P31648 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.57■□□□□ 0.24
Slc6a1P31648 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Slc6a1P31648 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Slc6a1P31648 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Slc6a1P31648 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.56■□□□□ 0.24
Slc6a1P31648 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc6a1P31648 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc6a1P31648 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a1P31648 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a1P31648 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.55■□□□□ 0.24
Slc6a1P31648 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a1P31648 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a1P31648 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a1P31648 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a1P31648 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a1P31648 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a1P31648 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.55■□□□□ 0.24
Slc6a1P31648 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a1P31648 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a1P31648 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a1P31648 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a1P31648 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.55■□□□□ 0.24
Slc6a1P31648 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a1P31648 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Slc6a1P31648 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a1P31648 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms