Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1P28660 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1P28660 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Nckap1P28660 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nckap1P28660 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1P28660 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1P28660 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1P28660 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.26■□□□□ 0.67
Nckap1P28660 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Nckap1P28660 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1P28660 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.25■□□□□ 0.67
Nckap1P28660 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1P28660 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1P28660 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nckap1P28660 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1P28660 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1P28660 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1P28660 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Nckap1P28660 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nckap1P28660 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Nckap1P28660 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1P28660 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nckap1P28660 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1P28660 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1P28660 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1P28660 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1P28660 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1P28660 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1P28660 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.23■□□□□ 0.67
Nckap1P28660 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nckap1P28660 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.23■□□□□ 0.67
Nckap1P28660 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Nckap1P28660 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1P28660 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1P28660 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nckap1P28660 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.22■□□□□ 0.67
Nckap1P28660 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.22■□□□□ 0.67
Nckap1P28660 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.22■□□□□ 0.67
Nckap1P28660 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nckap1P28660 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nckap1P28660 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nckap1P28660 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nckap1P28660 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nckap1P28660 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.22■□□□□ 0.67
Nckap1P28660 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nckap1P28660 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nckap1P28660 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nckap1P28660 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nckap1P28660 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nckap1P28660 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nckap1P28660 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.21■□□□□ 0.67
Nckap1P28660 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.21■□□□□ 0.67
Nckap1P28660 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nckap1P28660 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nckap1P28660 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nckap1P28660 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.21■□□□□ 0.67
Nckap1P28660 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.21■□□□□ 0.67
Nckap1P28660 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.21■□□□□ 0.67
Nckap1P28660 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nckap1P28660 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nckap1P28660 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nckap1P28660 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nckap1P28660 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nckap1P28660 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nckap1P28660 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nckap1P28660 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nckap1P28660 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nckap1P28660 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nckap1P28660 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nckap1P28660 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.2■□□□□ 0.66
Nckap1P28660 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.2■□□□□ 0.66
Nckap1P28660 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.2■□□□□ 0.66
Nckap1P28660 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nckap1P28660 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nckap1P28660 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nckap1P28660 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nckap1P28660 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nckap1P28660 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Nckap1P28660 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nckap1P28660 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nckap1P28660 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nckap1P28660 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nckap1P28660 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nckap1P28660 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.19■□□□□ 0.66
Nckap1P28660 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.19■□□□□ 0.66
Nckap1P28660 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nckap1P28660 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nckap1P28660 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nckap1P28660 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nckap1P28660 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nckap1P28660 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nckap1P28660 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nckap1P28660 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nckap1P28660 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nckap1P28660 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nckap1P28660 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nckap1P28660 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nckap1P28660 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nckap1P28660 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nckap1P28660 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms