Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd40lgP27548 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40lgP27548 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cd40lgP27548 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40lgP27548 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Cd40lgP27548 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40lgP27548 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40lgP27548 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Cd40lgP27548 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40lgP27548 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cd40lgP27548 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40lgP27548 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.77■□□□□ 0.43
Cd40lgP27548 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Cd40lgP27548 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Cd40lgP27548 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40lgP27548 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cd40lgP27548 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.76■□□□□ 0.43
Cd40lgP27548 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.76■□□□□ 0.43
Cd40lgP27548 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40lgP27548 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40lgP27548 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40lgP27548 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40lgP27548 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.76■□□□□ 0.43
Cd40lgP27548 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40lgP27548 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40lgP27548 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Cd40lgP27548 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40lgP27548 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Cd40lgP27548 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cd40lgP27548 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.75■□□□□ 0.43
Cd40lgP27548 Gm26833-201ENSMUST00000180899 440 ntBASIC17.75■□□□□ 0.43
Cd40lgP27548 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.75■□□□□ 0.43
Cd40lgP27548 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40lgP27548 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cd40lgP27548 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cd40lgP27548 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cd40lgP27548 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40lgP27548 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40lgP27548 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40lgP27548 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cd40lgP27548 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.74■□□□□ 0.43
Cd40lgP27548 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40lgP27548 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40lgP27548 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd40lgP27548 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40lgP27548 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Cd40lgP27548 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40lgP27548 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd40lgP27548 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40lgP27548 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40lgP27548 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cd40lgP27548 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Cd40lgP27548 Gm12251-201ENSMUST00000117893 792 ntBASIC17.73■□□□□ 0.43
Cd40lgP27548 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Cd40lgP27548 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.73■□□□□ 0.43
Cd40lgP27548 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.73■□□□□ 0.43
Cd40lgP27548 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.73■□□□□ 0.43
Cd40lgP27548 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cd40lgP27548 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cd40lgP27548 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.73■□□□□ 0.43
Cd40lgP27548 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40lgP27548 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40lgP27548 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40lgP27548 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40lgP27548 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40lgP27548 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Cd40lgP27548 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40lgP27548 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cd40lgP27548 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Cd40lgP27548 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40lgP27548 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40lgP27548 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40lgP27548 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cd40lgP27548 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40lgP27548 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40lgP27548 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40lgP27548 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.72■□□□□ 0.43
Cd40lgP27548 Gm43173-201ENSMUST00000202246 593 ntBASIC17.72■□□□□ 0.43
Cd40lgP27548 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40lgP27548 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.71■□□□□ 0.43
Cd40lgP27548 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40lgP27548 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40lgP27548 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40lgP27548 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40lgP27548 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cd40lgP27548 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40lgP27548 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.71■□□□□ 0.43
Cd40lgP27548 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cd40lgP27548 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40lgP27548 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Cd40lgP27548 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms